BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019A11LP1|AL427423
(674 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig622 112 9e-25
>3x_Contig622
Length = 1958
Score = 112 bits (56), Expect = 9e-25
Identities = 98/112 (87%)
Strand = Plus / Minus
Query: 4 gtgacccggtgaagatattggttaagcgggatgagatatccttggccgtgatactgccat 63
||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||
Sbjct: 608 gtgacccggtgaagatattggttaagcgggatgagatatccttggacgtgataaagcaat 549
Query: 64 attctgtggctgtcgacccggcagactggcagtttgataccctctgtgatct 115
||| ||||| ||| || || ||| ||| |||||||||| |||||||||||
Sbjct: 548 attatgtggatgtagaaaaggaagaatggaagtttgatacactctgtgatct 497
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1587
Number of Sequences: 1807
Number of extensions: 1587
Number of successful extensions: 183
Number of sequences better than 1.0e-20: 1
length of query: 674
length of database: 10,358,551
effective HSP length: 16
effective length of query: 658
effective length of database: 10,329,639
effective search space: 6796902462
effective search space used: 6796902462
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)